BacillusRegNet

BacillusRegNet is able to construct gene regulatory networks for closely related non-model Bacillus species. It uses the experimentally validated regulatory network of the model organism Bacillus subtilis and information about protein homologies to identify orthogonal transcription factors and predict the gene regulation relationships for 13 Bacillus and 2 GeoBacillus species.

Publications

• URL BibTeX
  G. Misirli, J. Hallinan, R. Röttger, J. Baumbach, A. Wipat
  BacillusRegNet: A transcriptional regulation database and analysis platform for Bacillus species
  in Journal of Integrative Bioinformatics, 11(2):244, 2014

  @ARTICLE{Misirli2014,
    title = {BacillusRegNet: A transcriptional regulation database and analysis platform for Bacillus species},
    author = {Misirli, G. and Hallinan, J. and Röttger, R. and Baumbach, J. and Wipat, A.},
    year = 2014,
    url = {http://journal.imbio.de/article.php?aid=244},
    journal = {Journal of Integrative Bioinformatics},
    volume = {11},
    number = {2},
    pages = {244}
  }